BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034F11SP1|AL429939
(831 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig498 1645 0.0
>3x_Contig498
Length = 2351
Score = 1645 bits (829), Expect = 0.0
Identities = 830/831 (99%)
Strand = Plus / Plus
Query: 1 acataattgatcaataaagacttcaagtgcgaacataagtcattttaacaacgcaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 acataattgatcaataaagacttcaagtgcgaacataagtcattttaacaacgcaaaaaa 913
Query: 61 gggttatgacgacgtaaatatgaagtgtaagaaaaaggcaatgggaagatgatcttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 gggttatgacgacgtaaatatgaagtgtaagaaaaaggcaatgggaagatgatcttttta 973
Query: 121 taatatttttcatttggagaatgcattttcgtaggagtaattggtagtagatgactttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 taatatttttcatttggagaatgcattttcgtaggagtaattggtagtagatgactttag 1033
Query: 181 atcattagtgactccatttgcaagagtggcaatgctactattgttactaccagtgcttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 atcattagtgactccatttgcaagagtggcaatgctactattgttactaccagtgcttcc 1093
Query: 241 attattattgttgcttgaacttggattgccgctgatagttttaccattttgagcattatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 attattattgttgcttgaacttggattgccgctgatagttttaccattttgagcattatt 1153
Query: 301 tgagttgctagttggttggccagaaccactgcttccactccttctgctgtttggaccacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 tgagttgctagttggttggccagaaccactgcttccactccttctgctgtttggaccacg 1213
Query: 361 aacaccaagtgggtttttagagaaactcaatctaattccacctttggtgttgtgtgcgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 aacaccaagtgggtttttagagaaactcaatctaattccacctttggtgttgtgtgcgcc 1273
Query: 421 aactggtcttggtaattgactaccatataattcggctagagctcttgtagcatgtgcgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1274 aactggtcttggtaattgactaccatataattcggctagagctcttgtagcatgtgcgac 1333
Query: 481 gtcttcaaactcaacaaagcacataggaccatgcccactgttattgttgttcttgtttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 gtcttcaaactcaacaaagcacataggaccatgcccactgttattgttgttcttgtttct 1393
Query: 541 gaatgataacctcttgaatcctttttgacctccaaatagttgtcgtagttcttgttcggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 gaatgataacctcttgaatcctttttgacctccaaatagttgtcgtagttcttgttcggt 1453
Query: 601 ggcatctggaggtaggttacccacataaagtgtattgcaaggtggattttgatcggctgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 ggcatctggaggtaggttacccacataaagtgtattgcaaggtggattttgatcggctgg 1513
Query: 661 attggctggaggaggaactcttgctaacaacgataagtccacctgagaaattccaggagt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1514 attggctggaggaggaactcttgctaacaacgataagtccacctgagaaattccaggagt 1573
Query: 721 attctgtaaaacacttgccacacttctggtgataggttgtgactgagtagagttgttagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 attctgtaaaacacttgccacacttctggtgataggttgtgactgagtagagttgttagc 1633
Query: 781 gttaacattagttgcwgatgaagaattactaatgttggttctgctgccaga 831
||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1634 gttaacattagttgcagatgaagaattactaatgttggttctgctgccaga 1684
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5987
Number of Sequences: 1807
Number of extensions: 5987
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 831
length of database: 10,358,551
effective HSP length: 16
effective length of query: 815
effective length of database: 10,329,639
effective search space: 8418655785
effective search space used: 8418655785
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)